PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_06308
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 233aa    MW: 26438 Da    PI: 10.0698
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_06308genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.61.1e-11109149350
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaar 50 
                  +GV++  k+ +W A I++      +k+++lg+ g+ eeAa+++++a+
  PEQU_06308 109 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEEAARLYDRAA 149
                 79**98..47*********4.....5********************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541715.17E-8108152IPR016177DNA-binding domain
PfamPF008471.2E-5108150IPR001471AP2/ERF domain
SMARTSM003801.3E-4108165IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.0E-6111154IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MVSIRRRRLL GLCSGKNSIP VELPEPIEGS NAIENHNKNA KSFSIHPMPS IASNRDKTVN  60
ISETSFGAAT VSASPIPKVE TNNYFPVKEI KRRRRHRRKY YEDQEPCIMR GVYFKNMKWQ  120
AAIKVDKKQI HLGTVGSQEE AARLYDRAAF LCGREPNFEL QEEEKKELSQ YKWDEFLAIT  180
RNAITSKKHQ RRGGVGRRKR SGIESQGSDI ELEKVLGGTS SMSDDGEMEP AAI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010929836.12e-94PREDICTED: ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_010929837.12e-94PREDICTED: ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_010929838.12e-94PREDICTED: ethylene-responsive transcription factor-like protein At4g13040
TrEMBLM0T4P93e-96M0T4P9_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr6P06510_0018e-96(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP75163545
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.26e-40ERF family protein